![]() ![]() "XDG_DATA_DIRS" "/usr/share/ubuntu-2d:/usr/share/gnome:/usr/local/share/:/usr/share/" "XDG_CONFIG_DIRS" "/etc/xdg/xdg-ubuntu-2d:/etc/xdg" "SSH_AUTH_SOCK" "/tmp/keyring-m9K6wh/ssh" "R_SYSTEM_ABI" "linux,gcc,gxx,gfortran,?" "R_LIBS_SITE" "/usr/local/lib/R/site-library:/usr/lib/R/site-library:/usr/lib/R/library" "PATH" "/usr/lib/lightdm/lightdm:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" ![]() "GNOME_KEYRING_CONTROL" "/tmp/keyring-m9K6wh" "GNOME_DESKTOP_SESSION_ID" "this-is-deprecated" This is the output for R : "COLORTERM" "gnome-terminal" Update 1: According to scottkosty's suggestion I checked the system environment in both R and RStudio and noticed few differences (though I have no idea about them). Also I can successfully compile pdf using sweave module in lyx. ![]() Rnw file is created in tmp folder (lyx_tmpbuf0 ) and can be complied successfully by R studio. > -> cbind -> cbind -> ameĠ1:00:51.043: In addition: Warning messages:Ġ1:00:51.052: is.na() applied to non-(list or vector) of type 'NULL'Ġ1:00:51.056: 2: In is.na(res) : is.na() applied to non-(list or vector) of type 'NULL'Ġ1:00:53.236: Error while exporting format: PDF (pdflatex)Ģ) The converter definition: Rscript -verbose -no-save -no-restore $$s/scripts/lyxknitr.R $$p$$i $$p$$o $$e $$rģ) My code chunk is note that the. I am getting an error during compilation while using the Knitr Module.ġ) The copy of the error message (from message pane) : 01:00:48.616: Previewing. Recently I shifted to Ubuntu with same version for Lyx. I have been using knitr with Lyx (2.1.4) in Windows for past few months. ![]()
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